BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D04SP1|AL425111
(1028 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1151 2007 0.0
>3x_Contig1151
Length = 5859
Score = 2007 bits (1010), Expect = 0.0
Identities = 1023/1028 (99%), Gaps = 1/1028 (0%)
Strand = Plus / Minus
Query: 1 atcaatattaaagagcgagacaccaggagttgctagtggattatcttgagcagttaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1401 atcaatattaaagagcgagacaccaggagttgctagtggattatcttgagcagttaaacc 1342
Query: 61 gagtttagctggatatattcataccttggtttccacagggaaaggaccaaaaaaaaaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 gagtttagctggatatattcataccttggtttccacagggaaaggaccaaaaaaaaaggt 1282
Query: 121 tttctttgccccctgtgggaattgaacccacgatccccgcattacgagtgcgatgcctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1281 tttctttgccccctgtgggaattgaacccacgatccccgcattacgagtgcgatgcctta 1222
Query: 181 ccacttggccaaaggggctggaaacaattttcaagcatctgaagtgagtttgacgaccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1221 ccacttggccaaaggggctggaaacaattttcaagcatctgaagtgagtttgacgaccat 1162
Query: 241 agacactaatgtttgcgtgctcctgtacacgtgatgcaatttcatcacttcctattgatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 agacactaatgtttgcgtgctcctgtacacgtgatgcaatttcatcacttcctattgatg 1102
Query: 301 cctactgtttaatatcaaccctgcccacggtaagtattctacttaccatgaccttctatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 cctactgtttaatatcaaccctgcccacggtaagtattctacttaccatgaccttctatt 1042
Query: 361 gaacatttaacggacgtgttatggataatactcaaaatgactaatgttatttgataatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 gaacatttaacggacgtgttatggataatactcaaaatgactaatgttatttgataatta 982
Query: 421 cactgaagcttctcataacaattggatatccaaatgttcaaaccaacaataatcttatcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 cactgaagcttctcataacaattggatatccaaatgttcaaaccaacaataatcttatcc 922
Query: 481 gcataataatagaaaaaacaccatattgaggcctgctgaccccagattttaccatgttgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 gcataataatagaaaaaacaccatattgaggcctgctgaccccagattttaccatgttgc 862
Query: 541 gtcaagggatacttggtatacgaagatacaacactttcagattacagtcgctttctgtgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 gtcaagggatacttggtatacgaagatacaacactttcagattacagtcgctttctgtgg 802
Query: 601 caaggaaacggcctgctgtacatactcatcatgaagttgatcatgaatcatcggatacac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 caaggaaacggcctgctgtacatactcatcatgaagttgatcatgaatcatcggatacac 742
Query: 661 ataaagcacaggaagaactagatagcatctggwatggtctttcaagaatgatatacactc 720
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 741 ataaagcacaggaagaactagatagcatctggaatggtctttcaagaatgatatacactc 682
Query: 721 ggaatttaacgatgtataattgtttcgttttgtttcagtattgtgggaaatcggctgatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaatttaacgatgtataattgtttcgttttgtttcagtattgtgggaaatcggctgatg 622
Query: 781 gttcattagacgaaagtkatgtctccagattgtaccatacgttacggaggaattacagga 840
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttcattagacgaaagtgatgtctccagattgtaccatacgttacggaggaattacagga 562
Query: 841 caagcaatgtgatatatacgggtagttttaaccaatcggtattcaacaattgttttaagg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caagcaatgtgatatatacgggtagttttaaccaatcggtattcaacaattgttttaagg 502
Query: 901 acgccatattaccggaaaataccaatgrattccttactcctgtcccagtttctgcaggta 960
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 acgccatattaccggaaaataccaatg-attccttactcctgtcccagtttctgcaggta 443
Query: 961 cagcaaccctctgttatttcaaagataatgtyaatagcagagaagcgtcattatacaccc 1020
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 442 cagcaaccctctgttatttcaaagataatgtcaatagcagagaagcgtcattatacacct 383
Query: 1021 tcagttgt 1028
||||||||
Sbjct: 382 tcagttgt 375
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7278
Number of Sequences: 1807
Number of extensions: 7278
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 1028
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1012
effective length of database: 10,329,639
effective search space: 10453594668
effective search space used: 10453594668
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)